PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G366300.1.p
Common NamePRUPE_ppa1027229mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 271aa    MW: 29468.8 Da    PI: 8.445
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G366300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.22.9e-053052223
                        EETTTTEEESSHHHHHHHHHH.T CS
             zf-C2H2  2 kCpdCgksFsrksnLkrHirt.H 23
                        +C+ Cg+ F+  ++L++H+   H
  Prupe.1G366300.1.p 30 VCSQCGEIFPKMDSLEHHQAIrH 52
                        8******************9877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS0002802952IPR007087Zinc finger, C2H2
PROSITE profilePS501578.8292957IPR007087Zinc finger, C2H2
SuperFamilySSF563993.36E-2854266No hitNo description
Gene3DG3DSA:3.90.228.107.6E-1661266IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MQFRKLSGCY ECHMIVDPSR YPIPRSSVCV CSQCGEIFPK MDSLEHHQAI RHAVSELGVE  60
DSGRNIVEII FKSSWQKKDI PICKIERILK VHNTQRTIQR FEDCRDAVKN RALGTTRKNP  120
RCAADGNELL RFHCASISCT LGARGSSSLC GSVPGCGVCT IIRHGFQGKA GGEGGKGVRT  180
TASSGRAHDS LSCMDGRRAM LVCRVIAGRV RRIADDAPTE EDALSSLSAP GSYDSVAGFV  240
GIYSNLEELV VYNPRAILPC FVVIYKALES *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007226467.10.0hypothetical protein PRUPE_ppa1027229mg, partial
RefseqXP_008221271.10.0PREDICTED: uncharacterized protein LOC103321258
TrEMBLM5XQ630.0M5XQ63_PRUPE; Uncharacterized protein (Fragment)
STRINGVIT_18s0001g14130.t011e-158(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103413037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-135C2H2-like zinc finger protein